IL_4V74_183

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GGU*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_183 not in the Motif Atlas

Geometric match to IL_7VFT_005

Geometric discrepancy: 0.2424

The information below is about IL_7VFT_005

Detailed Annotation

Isolated non-canonical cWW contact

Broad Annotation

No text annotation

Motif group

IL_00627.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

24

Unit IDs

4V74|1|BA|G|953
4V74|1|BA|G|954
4V74|1|BA|U|955
*
4V74|1|BA|G|962
4V74|1|BA|U|963
4V74|1|BA|C|964

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16