IL_4V75_072

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V75_072 not in the Motif Atlas

Homologous match to IL_7RQB_006

Geometric discrepancy: 0.1809

The information below is about IL_7RQB_006

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_04346.7

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

4V75|1|BA|G|188
4V75|1|BA|G|189
4V75|1|BA|A|190
4V75|1|BA|A|191
4V75|1|BA|C|192
4V75|1|BA|U|193
4V75|1|BA|G|194
*
4V75|1|BA|C|201
4V75|1|BA|U|202
4V75|1|BA|A|203
4V75|1|BA|A|204
4V75|1|BA|G|205
4V75|1|BA|U|206
4V75|1|BA|A|207
4V75|1|BA|C|208

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28