IL_4V75_198

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

4V75|1|AA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V75_198 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.3794

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4V75|1|AA|U|409
4V75|1|AA|G|410
4V75|1|AA|A|411
4V75|1|AA|A|412
4V75|1|AA|G|413
4V75|1|AA|A|414
4V75|1|AA|A|415
4V75|1|AA|G|416
*
4V75|1|AA|U|427
4V75|1|AA|G|428
4V75|1|AA|U|429
4V75|1|AA|A|430
4V75|1|AA|A|431
4V75|1|AA|A|432
4V75|1|AA|G|433

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4