IL_4V76_050

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

4V76|1|AA|A|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_050 not in the Motif Atlas

Homologous match to IL_4LFB_050

Geometric discrepancy: 0.2885

The information below is about IL_4LFB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4V76|1|AA|C|1158
4V76|1|AA|U|1159
4V76|1|AA|G|1160
4V76|1|AA|C|1161
*
4V76|1|AA|G|1175
4V76|1|AA|A|1176
4V76|1|AA|G|1177
4V76|1|AA|G|1178
4V76|1|AA|A|1179
4V76|1|AA|A|1180
4V76|1|AA|G|1181

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AI

30S ribosomal protein S9