IL_4V76_057

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4V76|1|AA|C|1400, 4V76|1|AA|A|1503

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_057 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.2213

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

4V76|1|AA|C|1399
4V76|1|AA|C|1400
4V76|1|AA|G|1401
*
4V76|1|AA|C|1501
4V76|1|AA|A|1502
4V76|1|AA|A|1503
4V76|1|AA|G|1504

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain A2

5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'