IL_4V76_060

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

4V76|1|AA|A|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_060 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.2893

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

4V76|1|AA|C|1407
4V76|1|AA|A|1408
4V76|1|AA|C|1409
*
4V76|1|AA|G|1491
4V76|1|AA|A|1492
4V76|1|AA|A|1493
4V76|1|AA|G|1494

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain A2

5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'

Chain AL

30S ribosomal protein S12

Chain BA

Large subunit ribosomal RNA; LSU rRNA