IL_4V76_073

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_073 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4626

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V76|1|BA|C|274
4V76|1|BA|C|275
4V76|1|BA|U|276
4V76|1|BA|G|277
4V76|1|BA|A|278
4V76|1|BA|A|279
4V76|1|BA|U|280
4V76|1|BA|C|281
*
4V76|1|BA|G|359
4V76|1|BA|U|360
4V76|1|BA|G|361
4V76|1|BA|A|362
4V76|1|BA|G|363

Current chains

Chain BA

23S ribosomal RNA

Nearby chains