IL_4V76_086

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_086 not in the Motif Atlas

Homologous match to IL_9DFE_022

Geometric discrepancy: 0.4782

The information below is about IL_9DFE_022

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4V76|1|BA|C|837
4V76|1|BA|C|838
*
4V76|1|BA|G|940
4V76|1|BA|A|941
4V76|1|BA|G|942

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BL

50S ribosomal protein L15