3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
4V76|1|BA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V76_096 not in the Motif Atlas
Homologous match to IL_5J7L_277
Geometric discrepancy: 0.144
The information below is about IL_5J7L_277
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

4V76|1|BA|C|998
4V76|1|BA|U|999
4V76|1|BA|A|1000
4V76|1|BA|A|1001
4V76|1|BA|G|1002
*
4V76|1|BA|C|1153
4V76|1|BA|G|1154
4V76|1|BA|A|1155
4V76|1|BA|A|1156
4V76|1|BA|G|1157

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BB
5S ribosomal RNA; 5S rRNA
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:


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