IL_4V76_148

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

4V76|1|BA|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_148 not in the Motif Atlas

Geometric match to IL_7D3J_001

Geometric discrepancy: 0.169

The information below is about IL_7D3J_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_84476.1

Basepair signature

cWW-cWW

Number of instances in this motif group

13

Unit IDs

4V76|1|BA|G|2110
4V76|1|BA|U|2111
4V76|1|BA|G|2112
4V76|1|BA|U|2113
4V76|1|BA|A|2114
4V76|1|BA|G|2115
4V76|1|BA|G|2116
4V76|1|BA|A|2117
4V76|1|BA|U|2118
4V76|1|BA|A|2119
4V76|1|BA|G|2120
*
4V76|1|BA|C|2178
4V76|1|BA|C|2179

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A3

Transfer RNA; tRNA

Chain B5

50S ribosomal protein L1