IL_4V76_179

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

ACG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_179 not in the Motif Atlas

Geometric match to IL_3NJ7_003

Geometric discrepancy: 0.1992

The information below is about IL_3NJ7_003

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

4V76|1|AA|A|1000
4V76|1|AA|C|1001
4V76|1|AA|G|1002
*
4V76|1|AA|C|1038
4V76|1|AA|G|1039
4V76|1|AA|U|1040

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14