IL_4V76_192

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_192 not in the Motif Atlas

Homologous match to IL_5J7L_392

Geometric discrepancy: 0.2694

The information below is about IL_5J7L_392

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.6

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

41

Unit IDs

4V76|1|BA|G|2454
4V76|1|BA|G|2455
*
4V76|1|BA|C|2496
4V76|1|BA|A|2497
4V76|1|BA|C|2498

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BM

50S ribosomal protein L16