3D structure

PDB id
4V77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
AGAAUUC*GAGGAAU
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V77_033 not in the Motif Atlas
Homologous match to IL_6CZR_363
Geometric discrepancy: 0.3683
The information below is about IL_6CZR_363
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V77|1|AA|A|673
4V77|1|AA|G|674
4V77|1|AA|A|675
4V77|1|AA|A|676
4V77|1|AA|U|677
4V77|1|AA|U|678
4V77|1|AA|C|679
*
4V77|1|AA|G|711
4V77|1|AA|A|712
4V77|1|AA|G|713
4V77|1|AA|G|714
4V77|1|AA|A|715
4V77|1|AA|A|716
4V77|1|AA|U|717

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AR
30S ribosomal protein S18
Chain BC
50S ribosomal protein L2

Coloring options:


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