IL_4V77_038

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUU*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_038 not in the Motif Atlas

Geometric match to IL_4J50_001

Geometric discrepancy: 0.2181

The information below is about IL_4J50_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

4V77|1|AA|G|833
4V77|1|AA|U|834
4V77|1|AA|U|835
*
4V77|1|AA|G|851
4V77|1|AA|G|852
4V77|1|AA|C|853

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AR

30S ribosomal protein S18

Chain AU

30S ribosomal protein S21