IL_4V77_137

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CGAAAUUCCUUG*CCUG

Length

16 nucleotides

Bulged bases

4V77|1|BA|A|1938, 4V77|1|BA|U|1944

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_137 not in the Motif Atlas

Homologous match to IL_7A0S_072

Geometric discrepancy: 0.4166

The information below is about IL_7A0S_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

4V77|1|BA|C|1934
4V77|1|BA|G|1935
4V77|1|BA|A|1936
4V77|1|BA|A|1937
4V77|1|BA|A|1938
4V77|1|BA|U|1939
4V77|1|BA|U|1940
4V77|1|BA|C|1941
4V77|1|BA|C|1942
4V77|1|BA|U|1943
4V77|1|BA|U|1944
4V77|1|BA|G|1945
*
4V77|1|BA|C|1961
4V77|1|BA|C|1962
4V77|1|BA|U|1963
4V77|1|BA|G|1964

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L2