IL_4V77_156

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

4V77|1|BA|G|2576, 4V77|1|BA|A|2577

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_156 not in the Motif Atlas

Geometric match to IL_4V9F_076

Geometric discrepancy: 0.3182

The information below is about IL_4V9F_076

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_87316.1

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

12

Unit IDs

4V77|1|BA|C|2510
4V77|1|BA|U|2511
4V77|1|BA|C|2512
*
4V77|1|BA|G|2574
4V77|1|BA|C|2575
4V77|1|BA|G|2576
4V77|1|BA|A|2577
4V77|1|BA|G|2578

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3