IL_4V78_068

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GGUU*AAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V78_068 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3538

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

4V78|1|BA|G|1
4V78|1|BA|G|2
4V78|1|BA|U|3
4V78|1|BA|U|4
*
4V78|1|BA|A|2899
4V78|1|BA|A|2900
4V78|1|BA|C|2901

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BJ

50S ribosomal protein L13