IL_4V79_020

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

4V79|1|AA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_020 not in the Motif Atlas

Homologous match to IL_6CZR_129

Geometric discrepancy: 0.3154

The information below is about IL_6CZR_129

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58819.1

Basepair signature

cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4V79|1|AA|U|409
4V79|1|AA|G|410
4V79|1|AA|A|411
4V79|1|AA|A|412
4V79|1|AA|G|413
4V79|1|AA|A|414
4V79|1|AA|A|415
4V79|1|AA|G|416
4V79|1|AA|G|417
*
4V79|1|AA|U|426
4V79|1|AA|U|427
4V79|1|AA|G|428
4V79|1|AA|U|429
4V79|1|AA|A|430
4V79|1|AA|A|431
4V79|1|AA|A|432
4V79|1|AA|G|433

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4