3D structure

PDB id
4V79 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
CUGC*GAGGAAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V79_049 not in the Motif Atlas
Homologous match to IL_4LFB_050
Geometric discrepancy: 0.2209
The information below is about IL_4LFB_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_42032.1
Basepair signature
cWW-cSH-cWW-tWH-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

4V79|1|AA|C|1158
4V79|1|AA|U|1159
4V79|1|AA|G|1160
4V79|1|AA|C|1161
*
4V79|1|AA|G|1175
4V79|1|AA|A|1176
4V79|1|AA|G|1177
4V79|1|AA|G|1178
4V79|1|AA|A|1179
4V79|1|AA|A|1180
4V79|1|AA|G|1181

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9

Coloring options:


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