IL_4V79_057
3D structure
- PDB id
- 4V79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V79|1|AA|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V79_057 not in the Motif Atlas
- Homologous match to IL_5J7L_363
- Geometric discrepancy: 0.5615
- The information below is about IL_5J7L_363
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V79|1|AA|C|1407
4V79|1|AA|A|1408
4V79|1|AA|C|1409
*
4V79|1|AA|G|1491
4V79|1|AA|A|1492
4V79|1|AA|A|1493
4V79|1|AA|G|1494
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain AL
- 30S ribosomal protein S12
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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