IL_4V79_082

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

4V79|1|BA|G|776, 4V79|1|BA|A|788, 4V79|1|BA|A|789, 4V79|1|BA|U|790

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_082 not in the Motif Atlas

Homologous match to IL_7RQB_023

Geometric discrepancy: 0.1839

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

4V79|1|BA|G|775
4V79|1|BA|G|776
4V79|1|BA|G|777
*
4V79|1|BA|C|787
4V79|1|BA|A|788
4V79|1|BA|A|789
4V79|1|BA|U|790
4V79|1|BA|C|791

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2

Chain BE

50S ribosomal protein L4