IL_4V79_123
3D structure
- PDB id
- 4V79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- UAUGUAG*UGAAA
- Length
- 12 nucleotides
- Bulged bases
- 4V79|1|BA|U|1714
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V79_123 not in the Motif Atlas
- Homologous match to IL_5J7L_309
- Geometric discrepancy: 0.195
- The information below is about IL_5J7L_309
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V79|1|BA|U|1712
4V79|1|BA|A|1713
4V79|1|BA|U|1714
4V79|1|BA|G|1715
4V79|1|BA|U|1716
4V79|1|BA|A|1717
4V79|1|BA|G|1718
*
4V79|1|BA|U|1742
4V79|1|BA|G|1743
4V79|1|BA|A|1744
4V79|1|BA|A|1745
4V79|1|BA|A|1746
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: