IL_4V79_164

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGC*GUAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_164 not in the Motif Atlas

Geometric match to IL_5ML7_010

Geometric discrepancy: 0.1957

The information below is about IL_5ML7_010

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

4V79|1|BA|G|2838
4V79|1|BA|G|2839
4V79|1|BA|C|2840
*
4V79|1|BA|G|2877
4V79|1|BA|U|2878
4V79|1|BA|A|2879
4V79|1|BA|C|2880

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17