IL_4V7A_075

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7A_075 not in the Motif Atlas

Homologous match to IL_5J7L_250

Geometric discrepancy: 0.1695

The information below is about IL_5J7L_250

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_04346.10

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

4V7A|1|BA|G|188
4V7A|1|BA|G|189
4V7A|1|BA|A|190
4V7A|1|BA|A|191
4V7A|1|BA|C|192
4V7A|1|BA|U|193
4V7A|1|BA|G|194
*
4V7A|1|BA|C|201
4V7A|1|BA|U|202
4V7A|1|BA|A|203
4V7A|1|BA|A|204
4V7A|1|BA|G|205
4V7A|1|BA|U|206
4V7A|1|BA|A|207
4V7A|1|BA|C|208

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28