IL_4V7B_005
3D structure
- PDB id
- 4V7B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Visualization of two tRNAs trapped in transit during EF-G-mediated translocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CGAA*UG
- Length
- 6 nucleotides
- Bulged bases
- 4V7B|1|AA|G|64, 4V7B|1|AA|A|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7B_005 not in the Motif Atlas
- Homologous match to IL_5J7L_005
- Geometric discrepancy: 0.0908
- The information below is about IL_5J7L_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
4V7B|1|AA|C|63
4V7B|1|AA|G|64
4V7B|1|AA|A|65
4V7B|1|AA|A|66
*
4V7B|1|AA|U|103
4V7B|1|AA|G|104
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AT
- 30S ribosomal protein S20
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