IL_4V7B_078

3D structure

PDB id

4V7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7B_078 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2355

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V7B|1|BA|C|274
4V7B|1|BA|C|275
4V7B|1|BA|U|276
4V7B|1|BA|G|277
4V7B|1|BA|A|278
4V7B|1|BA|A|279
4V7B|1|BA|U|280
4V7B|1|BA|C|281
*
4V7B|1|BA|G|359
4V7B|1|BA|U|360
4V7B|1|BA|G|361
4V7B|1|BA|A|362
4V7B|1|BA|G|363

Current chains

Chain BA

23S ribosomal RNA

Nearby chains