IL_4V7B_086

3D structure

PDB id

4V7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

4V7B|1|BA|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7B_086 not in the Motif Atlas

Homologous match to IL_7A0S_016

Geometric discrepancy: 0.0843

The information below is about IL_7A0S_016

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4V7B|1|BA|G|697
4V7B|1|BA|C|698
*
4V7B|1|BA|G|763
4V7B|1|BA|A|764
4V7B|1|BA|C|765

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2