IL_4V7C_061

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAG,CUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_061 not in the Motif Atlas

Geometric match to IL_5ED1_002

Geometric discrepancy: 0.178

The information below is about IL_5ED1_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4V7C|1|AA|G|1310
4V7C|1|AA|A|1311
4V7C|1|AA|G|1312
*
4V7C|1|AA|C|1325
4V7C|1|AA|U|1326
4V7C|1|AA|C|1327

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal protein S13

Chain AS

30S ribosomal protein S19