IL_4V7C_171

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAC,GUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_171 not in the Motif Atlas

Geometric match to IL_7A0S_031

Geometric discrepancy: 0.2776

The information below is about IL_7A0S_031

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

4V7C|1|BA|G|2141
4V7C|1|BA|A|2142
4V7C|1|BA|C|2143
*
4V7C|1|BA|G|2148
4V7C|1|BA|U|2149
4V7C|1|BA|C|2150

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AK

30S ribosomal protein S11

Chain BC

50S ribosomal protein L1