IL_4V7C_190

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

4V7C|1|BA|C|2712, 4V7C|1|BA|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7C_190 not in the Motif Atlas

Homologous match to IL_7A0S_097

Geometric discrepancy: 0.2236

The information below is about IL_7A0S_097

Detailed Annotation

Multiple bulged bases

Broad Annotation

Multiple bulged bases

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4V7C|1|BA|U|2695
4V7C|1|BA|U|2696
*
4V7C|1|BA|A|2711
4V7C|1|BA|C|2712
4V7C|1|BA|U|2713
4V7C|1|BA|G|2714

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BP

50S ribosomal protein L17

Chain BR

50S ribosomal protein L19