IL_4V7D_050

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7D_050 not in the Motif Atlas

Geometric match to IL_7A0S_048

Geometric discrepancy: 0.2087

The information below is about IL_7A0S_048

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V7D|1|AA|C|1351
4V7D|1|AA|U|1352
4V7D|1|AA|A|1353
4V7D|1|AA|A|1354
4V7D|1|AA|G|1355
*
4V7D|1|AA|C|1376
4V7D|1|AA|G|1377
4V7D|1|AA|A|1378
4V7D|1|AA|U|1379
4V7D|1|AA|G|1380

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A6

50S ribosomal protein L34

Chain AD

50S ribosomal protein L2