IL_4V7D_116

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

4V7D|1|AA|C|2712, 4V7D|1|AA|U|2713

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7D_116 not in the Motif Atlas

Homologous match to IL_5J7L_349

Geometric discrepancy: 0.1487

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4V7D|1|AA|U|2695
4V7D|1|AA|U|2696
*
4V7D|1|AA|A|2711
4V7D|1|AA|C|2712
4V7D|1|AA|U|2713
4V7D|1|AA|G|2714

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AQ

50S ribosomal protein L17

Chain AS

50S ribosomal protein L19