IL_4V7D_174

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

4V7D|1|BA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7D_174 not in the Motif Atlas

Homologous match to IL_5J7L_046

Geometric discrepancy: 0.223

The information below is about IL_5J7L_046

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

4V7D|1|BA|G|1048
4V7D|1|BA|U|1049
4V7D|1|BA|G|1050
*
4V7D|1|BA|C|1208
4V7D|1|BA|C|1209

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BN

30S ribosomal protein S14

Chain BZ

Elongation Factor G