3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
CG*CGCGGUAAUACGGAGG
Length
18 nucleotides
Bulged bases
4V7D|1|BA|G|530, 4V7D|1|BA|U|531, 4V7D|1|BA|A|532, 4V7D|1|BA|U|534
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7D|1|BA|C|504
4V7D|1|BA|G|505
*
4V7D|1|BA|C|526
4V7D|1|BA|G|527
4V7D|1|BA|C|528
4V7D|1|BA|G|529
4V7D|1|BA|G|530
4V7D|1|BA|U|531
4V7D|1|BA|A|532
4V7D|1|BA|A|533
4V7D|1|BA|U|534
4V7D|1|BA|A|535
4V7D|1|BA|C|536
4V7D|1|BA|G|537
4V7D|1|BA|G|538
4V7D|1|BA|A|539
4V7D|1|BA|G|540
4V7D|1|BA|G|541

Current chains

Chain BA
16S ribosomal RNA

Nearby chains

Chain BC
30S ribosomal protein S3
Chain BD
30S ribosomal protein S4
Chain BL
30S ribosomal protein S12
Chain BV
Transfer RNA; tRNA
Chain BX
mRNA
Chain BZ
Elongation Factor G

Coloring options:

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