3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
UUUAAUUCGAUGCAACGCGAAGAACCUUAC*GGCUA
Length
35 nucleotides
Bulged bases
4V7D|1|BA|G|971, 4V7D|1|BA|A|975, 4V7D|1|BA|G|976, 4V7D|1|BA|A|978
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7D|1|BA|U|955
4V7D|1|BA|U|956
4V7D|1|BA|U|957
4V7D|1|BA|A|958
4V7D|1|BA|A|959
4V7D|1|BA|U|960
4V7D|1|BA|U|961
4V7D|1|BA|C|962
4V7D|1|BA|G|963
4V7D|1|BA|A|964
4V7D|1|BA|U|965
4V7D|1|BA|G|966
4V7D|1|BA|C|967
4V7D|1|BA|A|968
4V7D|1|BA|A|969
4V7D|1|BA|C|970
4V7D|1|BA|G|971
4V7D|1|BA|C|972
4V7D|1|BA|G|973
4V7D|1|BA|A|974
4V7D|1|BA|A|975
4V7D|1|BA|G|976
4V7D|1|BA|A|977
4V7D|1|BA|A|978
4V7D|1|BA|C|979
4V7D|1|BA|C|980
4V7D|1|BA|U|981
4V7D|1|BA|U|982
4V7D|1|BA|A|983
4V7D|1|BA|C|984
*
4V7D|1|BA|G|1221
4V7D|1|BA|G|1222
4V7D|1|BA|C|1223
4V7D|1|BA|U|1224
4V7D|1|BA|A|1225

Current chains

Chain BA
16S ribosomal RNA

Nearby chains

Chain BI
30S ribosomal protein S9
Chain BJ
30S ribosomal protein S10
Chain BM
30S ribosomal protein S13
Chain BN
30S ribosomal protein S14
Chain BS
30S ribosomal protein S19
Chain BV
Transfer RNA; tRNA
Chain BW
Transfer RNA; tRNA

Coloring options:

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