IL_4V7D_246
3D structure
- PDB id
- 4V7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.6 Å
Loop
- Sequence
- UGCAUGG*UCAUCAUG
- Length
- 15 nucleotides
- Bulged bases
- 4V7D|1|BA|C|1054, 4V7D|1|BA|A|1201
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7D_246 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.1807
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V7D|1|BA|U|1052
4V7D|1|BA|G|1053
4V7D|1|BA|C|1054
4V7D|1|BA|A|1055
4V7D|1|BA|U|1056
4V7D|1|BA|G|1057
4V7D|1|BA|G|1058
*
4V7D|1|BA|U|1199
4V7D|1|BA|C|1200
4V7D|1|BA|A|1201
4V7D|1|BA|U|1202
4V7D|1|BA|C|1203
4V7D|1|BA|A|1204
4V7D|1|BA|U|1205
4V7D|1|BA|G|1206
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3
- Chain BJ
- 30S ribosomal protein S10
- Chain BN
- 30S ribosomal protein S14
- Chain BV
- Transfer RNA; tRNA
- Chain BX
- mRNA
- Chain BZ
- Elongation Factor G
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