IL_4V7E_023

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CCAAAGCC*GCAGCCG

Length

15 nucleotides

Bulged bases

4V7E|1|Aa|C|523

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|C|522
4V7E|1|Aa|C|523
4V7E|1|Aa|A|524
4V7E|1|Aa|A|525
4V7E|1|Aa|A|526
4V7E|1|Aa|G|527
4V7E|1|Aa|C|528
4V7E|1|Aa|C|529
*
4V7E|1|Aa|G|549
4V7E|1|Aa|C|550
4V7E|1|Aa|A|551
4V7E|1|Aa|G|552
4V7E|1|Aa|C|553
4V7E|1|Aa|C|554
4V7E|1|Aa|G|555

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CC

60S ribosomal protein L4

Chain CF

60S ribosomal protein L30

Chain CM

60S ribosomal protein L14E

Chain CS

60S ribosomal protein L20