IL_4V7E_090

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGG*CAUGAAAC

Length

11 nucleotides

Bulged bases

4V7E|1|Aa|A|2085, 4V7E|1|Aa|A|2086

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|1948
4V7E|1|Aa|G|1949
4V7E|1|Aa|G|1950
*
4V7E|1|Aa|C|2081
4V7E|1|Aa|A|2082
4V7E|1|Aa|U|2083
4V7E|1|Aa|G|2084
4V7E|1|Aa|A|2085
4V7E|1|Aa|A|2086
4V7E|1|Aa|A|2087
4V7E|1|Aa|C|2088

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain BI

40S ribosomal protein S8E

Chain BL

40S ribosomal protein S17

Chain CR

60S ribosomal protein L19E