IL_4V7E_119

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGGAGC*GCGCAAGUGAAAUACC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|2464
4V7E|1|Aa|G|2465
4V7E|1|Aa|G|2466
4V7E|1|Aa|A|2467
4V7E|1|Aa|G|2468
4V7E|1|Aa|C|2469
*
4V7E|1|Aa|G|2478
4V7E|1|Aa|C|2479
4V7E|1|Aa|G|2480
4V7E|1|Aa|C|2481
4V7E|1|Aa|A|2482
4V7E|1|Aa|A|2483
4V7E|1|Aa|G|2484
4V7E|1|Aa|U|2485
4V7E|1|Aa|G|2486
4V7E|1|Aa|A|2487
4V7E|1|Aa|A|2488
4V7E|1|Aa|A|2489
4V7E|1|Aa|U|2490
4V7E|1|Aa|A|2491
4V7E|1|Aa|C|2492
4V7E|1|Aa|C|2493

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain Cz

60S ribosomal protein L1