IL_4V7E_146

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CACGUUAG*CAAG

Length

12 nucleotides

Bulged bases

4V7E|1|Aa|A|3177, 4V7E|1|Aa|A|3201

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|C|3176
4V7E|1|Aa|A|3177
4V7E|1|Aa|C|3178
4V7E|1|Aa|G|3179
4V7E|1|Aa|U|3180
4V7E|1|Aa|U|3181
4V7E|1|Aa|A|3182
4V7E|1|Aa|G|3183
*
4V7E|1|Aa|C|3199
4V7E|1|Aa|A|3200
4V7E|1|Aa|A|3201
4V7E|1|Aa|G|3202

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CH

60S ribosomal protein L6

Chain CM

60S ribosomal protein L14E

Chain CO

60S ribosomal protein L13

Chain CS

60S ribosomal protein L20