IL_4V7E_193

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGGCGC*GUGUCU

Length

12 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|G|490
4V7E|1|Ad|G|491
4V7E|1|Ad|G|492
4V7E|1|Ad|C|493
4V7E|1|Ad|G|494
4V7E|1|Ad|C|495
*
4V7E|1|Ad|G|500
4V7E|1|Ad|U|501
4V7E|1|Ad|G|502
4V7E|1|Ad|U|503
4V7E|1|Ad|C|504
4V7E|1|Ad|U|505

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains

Chain BJ

40S ribosomal protein S4

Chain Be

40S ribosomal protein S30E