IL_4V7E_206

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

AUUCCGG*UCGGAGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|A|823
4V7E|1|Ad|U|824
4V7E|1|Ad|U|825
4V7E|1|Ad|C|826
4V7E|1|Ad|C|827
4V7E|1|Ad|G|828
4V7E|1|Ad|G|829
*
4V7E|1|Ad|U|853
4V7E|1|Ad|C|854
4V7E|1|Ad|G|855
4V7E|1|Ad|G|856
4V7E|1|Ad|A|857
4V7E|1|Ad|G|858
4V7E|1|Ad|U|859

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains

Chain CR

60S ribosomal protein L19E