IL_4V7E_224
3D structure
- PDB id
- 4V7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GCACCA*UCCCUGC
- Length
- 13 nucleotides
- Bulged bases
- 4V7E|1|Ad|C|1163
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7E|1|Ad|G|1160
4V7E|1|Ad|C|1161
4V7E|1|Ad|A|1162
4V7E|1|Ad|C|1163
4V7E|1|Ad|C|1164
4V7E|1|Ad|A|1165
*
4V7E|1|Ad|U|1625
4V7E|1|Ad|C|1626
4V7E|1|Ad|C|1627
4V7E|1|Ad|C|1628
4V7E|1|Ad|U|1629
4V7E|1|Ad|G|1630
4V7E|1|Ad|C|1631
Current chains
- Chain Ad
- 18S ribosomal RNA
Nearby chains
- Chain Ae
- Transfer RNA; tRNA
- Chain Af
- 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3'
- Chain BC
- 40S ribosomal protein S5
- Chain BF
- 40S ribosomal protein S7
- Chain BQ
- 40S ribosomal protein S9
- Chain BR
- 40S ribosomal protein S17E
- Chain Bc
- 40S ribosomal protein S28E
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