IL_4V7E_243

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GUAUAUAGC*GUAAUC

Length

15 nucleotides

Bulged bases

4V7E|1|Ad|U|1495, 4V7E|1|Ad|A|1524

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|G|1494
4V7E|1|Ad|U|1495
4V7E|1|Ad|A|1496
4V7E|1|Ad|U|1497
4V7E|1|Ad|A|1498
4V7E|1|Ad|U|1499
4V7E|1|Ad|A|1500
4V7E|1|Ad|G|1501
4V7E|1|Ad|C|1502
*
4V7E|1|Ad|G|1521
4V7E|1|Ad|U|1522
4V7E|1|Ad|A|1523
4V7E|1|Ad|A|1524
4V7E|1|Ad|U|1525
4V7E|1|Ad|C|1526

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains

Chain BD

40S ribosomal protein S3

Chain BT

40S ribosomal protein S19E

Chain BU

40S ribosomal protein S10

Chain Bd

40S ribosomal protein S14