IL_4V7E_267

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

AGACG*CCCAUGAAAAU

Length

16 nucleotides

Bulged bases

4V7E|1|Aa|C|1789, 4V7E|1|Aa|A|1790

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|A|1651
4V7E|1|Aa|G|1652
4V7E|1|Aa|A|1653
4V7E|1|Aa|C|1654
4V7E|1|Aa|G|1655
*
4V7E|1|Aa|C|1787
4V7E|1|Aa|C|1788
4V7E|1|Aa|C|1789
4V7E|1|Aa|A|1790
4V7E|1|Aa|U|1791
4V7E|1|Aa|G|1792
4V7E|1|Aa|A|1793
4V7E|1|Aa|A|1794
4V7E|1|Aa|A|1795
4V7E|1|Aa|A|1796
4V7E|1|Aa|U|1797

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CA

60S ribosomal protein L2

Chain Cg

60S ribosomal protein L34E

Chain Cp

60S ribosomal protein L43E