IL_4V7E_268

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CCUC*GGUGCG

Length

10 nucleotides

Bulged bases

4V7E|1|Aa|C|1775

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|C|1666
4V7E|1|Aa|C|1667
4V7E|1|Aa|U|1668
4V7E|1|Aa|C|1669
*
4V7E|1|Aa|G|1771
4V7E|1|Aa|G|1772
4V7E|1|Aa|U|1773
4V7E|1|Aa|G|1774
4V7E|1|Aa|C|1775
4V7E|1|Aa|G|1776

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CR

60S ribosomal protein L19E

Chain CU

60S ribosomal protein L22E

Chain Cg

60S ribosomal protein L34E