IL_4V7E_275

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGUGUAGGAUAAGU*ACUAC

Length

19 nucleotides

Bulged bases

4V7E|1|Aa|G|2453

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|2450
4V7E|1|Aa|G|2451
4V7E|1|Aa|U|2452
4V7E|1|Aa|G|2453
4V7E|1|Aa|U|2454
4V7E|1|Aa|A|2455
4V7E|1|Aa|G|2456
4V7E|1|Aa|G|2457
4V7E|1|Aa|A|2458
4V7E|1|Aa|U|2459
4V7E|1|Aa|A|2460
4V7E|1|Aa|A|2461
4V7E|1|Aa|G|2462
4V7E|1|Aa|U|2463
*
4V7E|1|Aa|A|2494
4V7E|1|Aa|C|2495
4V7E|1|Aa|U|2496
4V7E|1|Aa|A|2497
4V7E|1|Aa|C|2498

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain Cz

60S ribosomal protein L1