IL_4V7E_284
3D structure
- PDB id
- 4V7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GAG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 4V7E|1|Ad|U|384
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7E_284 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.5852
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4V7E|1|Ad|G|367
4V7E|1|Ad|A|368
4V7E|1|Ad|G|369
*
4V7E|1|Ad|C|380
4V7E|1|Ad|G|381
4V7E|1|Ad|A|382
4V7E|1|Ad|U|383
4V7E|1|Ad|U|384
4V7E|1|Ad|C|385
Current chains
- Chain Ad
- 18S ribosomal RNA
Nearby chains
- Chain BJ
- 40S ribosomal protein S4
- Chain BX
- 40S ribosomal protein S12
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