IL_4V7I_008
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- AGA*UCCU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7I_008 not in the Motif Atlas
- Homologous match to IL_4WF9_003
- Geometric discrepancy: 0.362
- The information below is about IL_4WF9_003
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_90351.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V7I|1|A8|A|42
4V7I|1|A8|G|43
4V7I|1|A8|A|44
*
4V7I|1|A8|U|434
4V7I|1|A8|C|435
4V7I|1|A8|C|436
4V7I|1|A8|U|437
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: