IL_4V7I_043
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 4V7I|1|A8|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7I_043 not in the Motif Atlas
- Homologous match to IL_7RQB_041
- Geometric discrepancy: 0.1896
- The information below is about IL_7RQB_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_43275.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
4V7I|1|A8|G|1031
4V7I|1|A8|A|1032
4V7I|1|A8|U|1033
4V7I|1|A8|G|1034
*
4V7I|1|A8|C|1121
4V7I|1|A8|G|1122
4V7I|1|A8|C|1123
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
- Chain A4
- 50S ribosomal protein L36
- Chain AG
- 50S ribosomal protein L6
- Chain AJ
- 50S ribosomal protein L13
- Chain AM
- 50S ribosomal protein L16
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